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  5. Ppi_g35905

Ppi_g35905


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g35905
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Ceric.03G102500.1 Ceric.03G102500 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01003697001 NAI1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
Gb_13728 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
LOC_Os03g12760.1 LOC_Os03g12760 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
LOC_Os03g46860.1 LOC_Os03g46860 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
LOC_Os03g51580.1 LOC_Os03g51580 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
LOC_Os12g43620.1 LOC_Os12g43620 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
Lfl_g16271 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_94246g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g03516 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37020 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17525 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31815 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g106460.4.1 Solyc01g106460 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
Solyc02g091810.2.1 Solyc02g091810 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Solyc05g009640.4.1 Solyc05g009640 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g39817 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000934_P001 Zm00001e000934 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Zm00001e002570_P001 Zm00001e002570 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e003313_P001 NAI1, Zm00001e003313 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Zm00001e003314_P001 Zm00001e003314 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Zm00001e012122_P001 Zm00001e012122 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 199 245
No external refs found!