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Description : regulatory factor *(RIQ) of thylakoid grana stacking & original description: none
Gene families : OG0004779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004779_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g35554 | |
| Cluster | HCCA: Cluster_148 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g00516 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g17180 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18697 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g05587 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12282 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17265 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008063001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05217 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04786 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g04787 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15112 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20319 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| MF | GO:0009975 | cyclase activity | IEP | HCCA |
| MF | GO:0009976 | tocopherol cyclase activity | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009500 | DUF1118 | 131 | 241 |
| No external refs found! |