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  5. Ppi_g35462

Ppi_g35462 (RPL18)


Aliases : RPL18

Description : component *(eL18) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g35462
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT3G05590 RPL18 ribosomal protein L18 0.06 OrthoFinder output from all 47 species
Adi_g013370 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g064904 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g086059 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g35052 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ala_g38600 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aop_g02367 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g38766 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010796 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042750 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.09G043000.1 RPL18, Ceric.09G043000 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.38G049200.1 RPL18, Ceric.38G049200 component *(eL18) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.18 RPL18 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum 0.08 OrthoFinder output from all 47 species
Cre12.g512600 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Dac_g03575 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Dac_g26189 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g41478 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dde_g44985 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g03208 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01028036001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01035120001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Gb_21301 RPL18 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os03g22180.1 LOC_Os03g22180 component RPL18 of LSU proteome component 0.07 OrthoFinder output from all 47 species
LOC_Os05g06310.1 LOC_Os05g06310 component RPL18 of LSU proteome component 0.07 OrthoFinder output from all 47 species
LOC_Os07g47780.1 LOC_Os07g47780 component RPL18 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Len_g14018 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Msp_g40679 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ore_g19871 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_5330V3.1 RPL18, Pp3c1_5330 ribosomal protein L18 0.05 OrthoFinder output from all 47 species
Pp3c2_32510V3.1 RPL18, Pp3c2_32510 ribosomal protein L18 0.07 OrthoFinder output from all 47 species
Pp3c2_34080V3.1 RPL18, Pp3c2_34080 ribosomal protein L18 0.05 OrthoFinder output from all 47 species
Pp3c7_22030V3.1 RPL18, Pp3c7_22030 ribosomal protein L18 0.04 OrthoFinder output from all 47 species
Ppi_g27061 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ppi_g56097 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017487 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g06146 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g06147 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g11426 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g11427 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Sam_g24421 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g35041 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo267976 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Solyc01g099900.4.1 RPL18, Solyc01g099900 component RPL18 of LSU proteome component 0.1 OrthoFinder output from all 47 species
Solyc09g075290.3.1 RPL18, Solyc09g075290 component RPL18 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Spa_g19308 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g21425 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g43867 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g50566 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e026750_P001 Zm00001e026750 component RPL18 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e031155_P001 Zm00001e031155 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e035836_P001 Zm00001e035836 component RPL18 of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004615 phosphomannomutase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 13 195
No external refs found!