Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8
Description : subfamily ABCG transporter & original description: none
Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00224800 | ATPDR3, PDR3,... | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00122p00120860 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
AT1G15210 | ATPDR7, PDR7 | pleiotropic drug resistance 7 | 0.03 | OrthoFinder output from all 47 species | |
AT3G30842 | ATPDR10, PDR10 | pleiotropic drug resistance 10 | 0.03 | OrthoFinder output from all 47 species | |
AT4G15230 | ATPDR2, PDR2 | pleiotropic drug resistance 2 | 0.02 | OrthoFinder output from all 47 species | |
Ala_g16443 | PDR6, ATPDR6 | subfamily ABCG transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene20025.t1 | PDR1, ATPDR1,... | subfamily ABCG transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g12912 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g29011 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01034748001 | PDR11, ATPDR11 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g42350.1 | ABCG40, PDR12,... | subfamily ABCG transporter | 0.03 | OrthoFinder output from all 47 species | |
MA_10429038g0010 | ATPDR7, PDR7 | subfamily ABCG transporter | 0.01 | OrthoFinder output from all 47 species | |
Msp_g14770 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g17304 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pp3c2_34070V3.1 | ATPDR3, PDR3, Pp3c2_34070 | pleiotropic drug resistance 3 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0005.g002637 | PDR6, ATPDR6 | subfamily ABCG transporter & original description: CDS=213-4610 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0025.g009392 | ABCG40, PDR12,... | subfamily ABCG transporter & original description: CDS=1-4470 | 0.03 | OrthoFinder output from all 47 species | |
Smo99541 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
Spa_g06968 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030669_P001 | PEN3, ABCG36,... | subfamily ABCG transporter | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e033689_P001 | PDR11, ATPDR11,... | subfamily ABCG transporter | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039353_P001 | PIS1, ABCG37,... | subfamily ABCG transporter | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | HCCA |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008172 | S-methyltransferase activity | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009086 | methionine biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | HCCA |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No external refs found! |