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Ppi_g31967 (RPL27)


Aliases : RPL27

Description : component *(bL27c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g31967
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00039290 RPL27,... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT5G40950 RPL27 ribosomal protein large subunit 27 0.04 OrthoFinder output from all 47 species
Adi_g016906 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g25736 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008370 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g10062 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.02G065700.1 RPL27, Ceric.02G065700 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.47 No alias 50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea 0.03 OrthoFinder output from all 47 species
Cre06.g300800 RPL27 50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g13830 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dde_g18021 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g20192 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os01g69950.1 RPL27, LOC_Os01g69950 component psRPL27 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Len_g00370 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g00153 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Mp5g06170.1 RPL27 component psRPL27 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Pir_g09149 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009407 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Smo159042 RPL27 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Solyc11g068820.3.1 RPL27, Solyc11g068820 component psRPL27 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Tin_g00464 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 134 213
No external refs found!