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  5. Ppi_g31815

Ppi_g31815


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g31815
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AT2G22760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Ceric.03G102500.1 Ceric.03G102500 bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g04159 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15294 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002833001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01003697001 NAI1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
LOC_Os03g12760.1 LOC_Os03g12760 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
LOC_Os03g46860.1 LOC_Os03g46860 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
LOC_Os03g51580.1 LOC_Os03g51580 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
LOC_Os12g43620.1 LOC_Os12g43620 transcription factor (bHLH). bHLH-IVa-class iron... 0.07 OrthoFinder output from all 47 species
Len_g13277 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20093 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30933 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_4761g0020 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
MA_50811g0010 NAI1 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
MA_94246g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g48784 NAI1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44625 NAI1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35905 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08929 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g106460.4.1 Solyc01g106460 transcription factor (bHLH). bHLH-IVa-class iron... 0.05 OrthoFinder output from all 47 species
Solyc05g009640.4.1 Solyc05g009640 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc06g064580.2.1 Solyc06g064580 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Solyc06g064590.3.1 Solyc06g064590 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Zm00001e000935_P001 Zm00001e000935 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Zm00001e002570_P001 Zm00001e002570 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e003313_P001 NAI1, Zm00001e003313 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Zm00001e003314_P001 Zm00001e003314 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 263 310
No external refs found!