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  5. Ppi_g31204

Ppi_g31204


Description : membrane trafficking factor *(GFS9) & original description: none


Gene families : OG0003462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g31204
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT3G28430 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Adi_g112310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39003 No alias membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32639 No alias membrane trafficking factor *(GFS9) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g34035 No alias membrane trafficking factor *(GFS9) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42412.t1 Aspi01Gene42412 membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014134 No alias membrane trafficking factor *(GFS9) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z252700.1 Ceric.1Z252700 membrane trafficking factor *(GFS9) & original... 0.03 OrthoFinder output from all 47 species
Cre12.g515250 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g01968 No alias membrane trafficking factor *(GFS9) & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g01617 No alias membrane trafficking factor *(GFS9) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029303001 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g11932 No alias membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g05320.1 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Smo405955 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc07g018100.2.1 Solyc07g018100 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e040667_P003 Zm00001e040667 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004788 thiamine diphosphokinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR045820 CLEC16A/TT9_C 241 332
IPR019155 CLEC16A/TT9_N 41 191
No external refs found!