Ppi_g30808

Description : component *(Sec23) of Sec23/24 cargo adaptor subcomplex & original description: none

Gene families : OG0001171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001171_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g30808
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00266230	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	OrthoFinder output from all 47 species
Cre03.g180850	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.03	OrthoFinder output from all 47 species
Ehy_g01501	No alias	component *(Sec23) of Sec23/24 cargo adaptor subcomplex...	0.02	OrthoFinder output from all 47 species
Mp2g15530.1	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.02	OrthoFinder output from all 47 species
Nbi_g05423	No alias	component *(Sec23) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Pir_g15054	No alias	component *(Sec23) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Solyc03g005380.3.1	Solyc03g005380	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0019915	lipid storage	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006900	Sec23/24_helical_dom	518	616
IPR007123	Gelsolin-like_dom	632	718
IPR006896	Sec23/24_trunk_dom	130	390
IPR006895	Znf_Sec23_Sec24	54	91
IPR012990	Sec23_24_beta_S	402	505

External Links

No external refs found!

Ppi_g30808

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation