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  5. Ppi_g30180

Ppi_g30180


Description : not classified & original description: none


Gene families : OG0000797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g30180
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT3G03440 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G31890 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene61264.t1 Aspi01Gene61264 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G063200.1 Ceric.21G063200 not classified & original description: pacid=50603116... 0.04 OrthoFinder output from all 47 species
Dde_g08978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032397001 No alias U-box domain-containing protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo402458 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc02g063320.4.1 Solyc02g063320 U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g076930.2.1 Solyc02g076930 U-box domain-containing protein 45 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 97 132
No external refs found!