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  5. Ppi_g29856

Ppi_g29856


Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g29856

Target Alias Description ECC score Gene Family Method Actions
Aev_g07244 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29974 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62425 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05318 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01008694001 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01031500001 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g16468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 36 447
IPR025110 AMP-bd_C 456 531
No external refs found!