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  5. Ppi_g28967

Ppi_g28967 (RHM1, ROL1, ATRHM1)


Aliases : RHM1, ROL1, ATRHM1

Description : UDP-L-rhamnose synthase *(RHM) & original description: none


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g28967

Target Alias Description ECC score Gene Family Method Actions
AT3G14790 ATRHM3, RHM3 rhamnose biosynthesis 3 0.05 OrthoFinder output from all 47 species
Adi_g010835 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g048696 NRS/ER, UER1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05083 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01244 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g083800 RHM1, ROL1, ATRHM1 Trifunctional UDP-glucose... 0.02 OrthoFinder output from all 47 species
Dcu_g19045 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014091001 ATRHM3, RHM3 Carbohydrate metabolism.nucleotide sugar... 0.05 OrthoFinder output from all 47 species
LOC_Os02g45540.1 NRS/ER, UER1,... UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Mp6g02720.1 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005330 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g10633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g007480.4.1 RHM1, ROL1,... UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 13 318
No external refs found!