Aev_g10813

Description : component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination heterodimer & original description: none

Gene families : OG0001881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001881_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g10813

Target	Alias	Description	ECC score	Gene Family Method
Adi_g060029	No alias	component *(BRAT1) of anti-silencing regulator complex &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene22599.t1	Aspi01Gene22599	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0006.g010210	No alias	component *(BRAT1) of anti-silencing regulator complex &...	0.03	OrthoFinder output from all 47 species
Cba_g07630	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g13002	No alias	component *(BRAT1) of anti-silencing regulator complex &...	0.03	OrthoFinder output from all 47 species
Cba_g14633	No alias	component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination...	0.03	OrthoFinder output from all 47 species
Cre01.g038151	No alias	ATPase family AAA domain-containing protein At1g05910...	0.01	OrthoFinder output from all 47 species
GSVIVT01010750001	No alias	ATPase family AAA domain-containing protein At1g05910...	0.03	OrthoFinder output from all 47 species
Gb_05160	No alias	ATPase family AAA domain-containing protein At1g05910...	0.03	OrthoFinder output from all 47 species
Gb_11471	No alias	component BRCA1\|BARD1 of BRCA1â€“BARD1 DNA-damage...	0.04	OrthoFinder output from all 47 species
LOC_Os01g47800.1	LOC_Os01g47800	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Len_g11424	No alias	component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination...	0.02	OrthoFinder output from all 47 species
Lfl_g18945	No alias	component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination...	0.02	OrthoFinder output from all 47 species
MA_10425878g0020	No alias	ATPase family AAA domain-containing protein At1g05910...	0.03	OrthoFinder output from all 47 species
MA_10432357g0010	No alias	ATPase family AAA domain-containing protein At1g05910...	0.04	OrthoFinder output from all 47 species
Mp2g00420.1	No alias	ATPase family AAA domain-containing protein At1g05910...	0.03	OrthoFinder output from all 47 species
Msp_g15700	No alias	component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination...	0.02	OrthoFinder output from all 47 species
Ore_g33221	No alias	component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination...	0.03	OrthoFinder output from all 47 species
Ppi_g01388	No alias	component *(BRAT1) of anti-silencing regulator complex &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023552	No alias	component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination...	0.03	OrthoFinder output from all 47 species
Smo170139	No alias	ATPase family AAA domain-containing protein At1g05910...	0.03	OrthoFinder output from all 47 species
Smo23739	No alias	ATPase family AAA domain-containing protein At1g05910...	0.02	OrthoFinder output from all 47 species
Zm00001e034695_P003	Zm00001e034695	ATPase family AAA domain-containing protein At1g05910...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	1009	1038
IPR003959	ATPase_AAA_core	845	980

External Links

No external refs found!

Aev_g10813

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation