1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g27129

Ppi_g27129


Description : component *(uS4) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001396_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g27129
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT5G15200 No alias Ribosomal protein S4 0.05 OrthoFinder output from all 47 species
Adi_g066051 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aev_g06382 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ala_g15543 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene14214.t1 Aspi01Gene14214 component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0276.g061449 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.04G104600.1 Ceric.04G104600 component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000826.24 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01008028001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01011384001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020020001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g05980.1 LOC_Os03g05980 component RPS9 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os11g38959.1 LOC_Os11g38959 component RPS9 of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_10429805g0030 No alias component RPS9 of SSU proteome 0.05 OrthoFinder output from all 47 species
MA_10431745g0020 No alias component RPS9 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp3g00520.1 No alias component RPS9 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp6g10930.1 No alias component RPS9 of SSU proteome 0.05 OrthoFinder output from all 47 species
Pir_g02692 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pir_g07949 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pp3c13_19780V3.1 Pp3c13_19780 Ribosomal protein S4 0.02 OrthoFinder output from all 47 species
Pp3c4_15290V3.1 Pp3c4_15290 Ribosomal protein S4 0.03 OrthoFinder output from all 47 species
Smo157263 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo74302 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g010540.3.1 Solyc01g010540 component RPS9 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc04g005680.4.1 Solyc04g005680 component RPS9 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc05g007250.3.1 Solyc05g007250 component RPS9 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e010819_P002 Zm00001e010819 component RPS9 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e018345_P001 Zm00001e018345 component RPS9 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e037961_P002 Zm00001e037961 component RPS9 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 109 152
IPR001912 Ribosomal_S4/S9_N 8 108
No external refs found!