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  5. Ppi_g27122

Ppi_g27122


Description : not classified & original description: none


Gene families : OG0000877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g27122

Target Alias Description ECC score Gene Family Method Actions
Aev_g12459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g28245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68620 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g06248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g20302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g20506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44995 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g48996 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g49556 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006913 CENP-V/GFA 24 117
No external refs found!