Aliases : TPS02
Description : EC_4.2 carbon-oxygen lyase & original description: none
Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g26881 | |
Cluster | HCCA: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cba_g22842 | CPS, ATCPS1,... | EC_5.5 intramolecular lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g30746 | KS, KS1, ATKS1, ATKS, GA2 | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ceric.05G074100.1 | CPS, ATCPS1,... | EC_5.5 intramolecular lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g25280 | KS, KS1, ATKS1, ATKS, GA2 | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036724001 | KS, KS1, ATKS1, ATKS, GA2 | Phytohormones.gibberellin.synthesis.ent-kaurene synthase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g28530.2 | KS, KS1, ATKS1,... | ent-kaurene synthase | 0.02 | OrthoFinder output from all 47 species | |
Pir_g45505 | CPS, ATCPS1,... | EC_5.5 intramolecular lyase & original description: none | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEA | Interproscan |
MF | GO:0010333 | terpene synthase activity | IEA | Interproscan |
MF | GO:0016829 | lyase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005630 | Terpene_synthase_metal-bd | 99 | 361 |
No external refs found! |