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  5. Ppi_g23719

Ppi_g23719 (UBC5)


Aliases : UBC5

Description : E2 ubiquitin-conjugating enzyme *(UBC4) & original description: none


Gene families : OG0001369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g23719

Target Alias Description ECC score Gene Family Method Actions
Als_g06703 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Als_g11629 UBC4, ATUBC4 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47654.t1 UBC5, Aspi01Gene47654 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16478 No alias E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Solyc10g012240.3.1 UBC5, Solyc10g012240 ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 11 142
No external refs found!