Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g22544 | |
Cluster | HCCA: Cluster_104 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Pp3c11_3090V3.1 | RPL34, Pp3c11_3090 | Ribosomal protein L34e superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c1_1800V3.1 | RPL34, Pp3c1_1800 | Ribosomal protein L34e superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c7_21380V3.1 | Pp3c7_21380 | Ribosomal protein L34e superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
Sam_g05824 | No alias | component *(eL34) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008380 | RNA splicing | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008195 | Ribosomal_L34Ae | 49 | 142 |
No external refs found! |