Zm00001d028513 (GRMZM2G143655)

Aliases : GRMZM2G143655

Description : 35.2 not assigned.unknown The PYM gene encodes a protein capable of interacting with MAGO, and Y14, whose orthologs form part of the exon junction complex in animal cells. In vitro binding assays indicate that PYM can bind to MAGO and Y14 either individually, or when they are together. But, MAGO-Y14-PYM ternary complexes are difficult to detect in vivo in Arabidopsis based on pull-down experiments. However there is some evidence for a weak association in Arabidopsis flowers. PYM appears primarily cytoplasmic, but it also seems to into the nucleus at times. Its nuclear localization signal has not been rigorously defined, but there is evidence for a nuclear export signal between amino acids 171-205 in the C-terminus. partner of Y14-MAGO (PYM)

Gene families : OG_01_0005026 (Gene family) Phylogenetic Tree(s): OG0005026_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d028513
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G11400 PYM partner of Y14-MAGO 0.03 Gene family
Cpa|evm.model.tig00001424.6 No alias No description available 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015362 WIBG_mago-bd 21 47
No external refs found!