1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g20004

Ppi_g20004 (ATCAD3, CAD3)


Aliases : ATCAD3, CAD3

Description : not classified & original description: none


Gene families : OG0006881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006881_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g20004
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Aev_g44040 ATCAD9, CAD9 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g68239 ATCAD3, CAD3 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Cba_g71748 CAD2, ATCAD2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g08059 CAD6, ATCAD6 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ppi_g04361 ATCAD3, CAD3 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Ppi_g35488 ATCAD9, CAD9 not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008174 mRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013154 ADH-like_N 34 107
No external refs found!