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  5. Ppi_g18925

Ppi_g18925


Description : not classified & original description: none


Gene families : OG0000317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18925

Target Alias Description ECC score Gene Family Method Actions
AT1G74280 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G36290 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G02970 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g11848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33562.t1 Aspi01Gene33562 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59961.t1 Aspi01Gene59961 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g54173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G044100.1 Ceric.23G044100 not classified & original description: pacid=50610147... 0.02 OrthoFinder output from all 47 species
Ceric.26G028200.1 Ceric.26G028200 not classified & original description: pacid=50599089... 0.02 OrthoFinder output from all 47 species
Ehy_g01305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g63990.1 LOC_Os01g63990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g02514.1 LOC_Os03g02514 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g37700.1 LOC_Os10g37700 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g37710.1 LOC_Os10g37710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g20947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012183 No alias not classified & original description: CDS=1236-2741 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012532 No alias not classified & original description: CDS=128-1231 0.02 OrthoFinder output from all 47 species
Sam_g16650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo80078 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc05g055290.3.1 Solyc05g055290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g074340.3.1 Solyc06g074340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g007380.3.1 Solyc09g007380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g009550.4.1 Solyc09g009550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g27003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002136_P001 Zm00001e002136 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019210_P001 Zm00001e019210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 182 465
No external refs found!