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  5. Ppi_g18890

Ppi_g18890 (ELF6)


Aliases : ELF6

Description : histone demethylase *(PKDM9) & original description: none


Gene families : OG0004407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004407_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18890

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00114640 ELF6,... RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00181100 REF6,... RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from all 47 species
AT3G48430 REF6 relative of early flowering 6 0.02 OrthoFinder output from all 47 species
Ala_g07663 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16153 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32477.t1 REF6, Aspi01Gene32477 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39866 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11622 ELF6 histone demethylase *(PKDM9) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007564001 REF6 RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder output from all 47 species
LOC_Os03g05680.1 ELF6, LOC_Os03g05680 transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
LOC_Os12g18150.1 REF6, LOC_Os12g18150 histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
MA_140116g0010 GTF2H2, ATGTF2H2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g07610.1 ELF6 histone demethylase (PKDM9). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020516 ELF6 histone demethylase *(PKDM9) & original description: CDS=1-5949 0.03 OrthoFinder output from all 47 species
Solyc03g111590.4.1 REF6, Solyc03g111590 histone demethylase (PKDM9). transcription factor (JUMONJI) 0.05 OrthoFinder output from all 47 species
Zm00001e028534_P001 REF6, Zm00001e028534 histone demethylase (PKDM9). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Zm00001e038984_P001 ELF6, Zm00001e038984 histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003349 JmjN 105 138
IPR003347 JmjC_dom 449 568
No external refs found!