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Ppi_g18687 (ATGCN1, GCN1)


Aliases : ATGCN1, GCN1

Description : not classified & original description: none


Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18687

Target Alias Description ECC score Gene Family Method Actions
Als_g00956 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40172 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05138 ATGCN1, GCN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.51 ATGCN1, GCN1 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g09935 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_21382 ATGCN1, GCN1 ABC transporter F family member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g01954 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05066 ATGCN1, GCN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04312 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07883 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04071 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 284 360
IPR003439 ABC_transporter-like_ATP-bd 400 531
IPR003439 ABC_transporter-like_ATP-bd 90 245
No external refs found!