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  5. Ppi_g17442

Ppi_g17442


Description : not classified & original description: none


Gene families : OG0004492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17442
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00232940 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT5G16210 No alias HEAT repeat-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g089336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015201 No alias not classified & original description: CDS=3367-3786 0.02 OrthoFinder output from all 47 species
Ceric.07G087500.1 Ceric.07G087500 not classified & original description: pacid=50627378... 0.03 OrthoFinder output from all 47 species
Dcu_g18666 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01030979001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os01g33060.1 LOC_Os01g33060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g35911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436559g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g00840.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g31275 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017761 No alias not classified & original description: CDS=318-3770 0.03 OrthoFinder output from all 47 species
Smo405761 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g086330.4.1 Solyc02g086330 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018206 peptidyl-methionine modification IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!