Ppi_g17399


Description : component *(Sec23) of Sec23/24 cargo adaptor subcomplex & original description: none


Gene families : OG0001171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001171_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17399

Target Alias Description ECC score Gene Family Method Actions
Ala_g02405 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001408.15 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Len_g04820 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Lfl_g02182 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR006900 Sec23/24_helical_dom 523 621
IPR012990 Sec23_24_beta_S 404 509
IPR006895 Znf_Sec23_Sec24 54 92
IPR007123 Gelsolin-like_dom 636 723
IPR006896 Sec23/24_trunk_dom 121 393
No external refs found!