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  5. Ppi_g17370

Ppi_g17370


Description : component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW) complex & original description: none


Gene families : OG0005027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005027_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Ppi_g17370

Target Alias Description ECC score Gene Family Method Actions
AT2G40360 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g024474 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.03 OrthoFinder output from all 47 species
Ala_g02362 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000382.38 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre10.g417950 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g10502 No alias component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.04 OrthoFinder output from all 47 species
LOC_Os07g25440.1 LOC_Os07g25440 component BOP1 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.03 OrthoFinder output from all 47 species
Smo165451 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Smo269521 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Solyc01g103720.4.1 Solyc01g103720 component BOP1 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.03 OrthoFinder output from all 47 species
Zm00001e017600_P002 Zm00001e017600 component BOP1 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR012953 BOP1_N_dom 126 382
IPR001680 WD40_repeat 632 665
IPR001680 WD40_repeat 683 722
IPR001680 WD40_repeat 385 420
No external refs found!