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  5. Ppi_g16821

Ppi_g16821 (RAP2.2)


Aliases : RAP2.2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g16821

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00029210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g02279 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g03062 DREB26 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aev_g04879 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04224 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g36600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37143 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g54140 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g58152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053565 RAP2.6 subgroup ERF-X transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0233.g059392 DEAR3 not classified & original description: CDS=1-1401 0.02 OrthoFinder output from all 47 species
Ceric.1Z027000.1 ERF110, Ceric.1Z027000 not classified & original description: pacid=50632868... 0.02 OrthoFinder output from all 47 species
Ceric.34G045400.1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G041000.1 Ceric.35G041000 subgroup ERF-X transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g16227 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17641 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25479 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03378 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Gb_32806 DREB2A, DREB2 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g06330.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g34260.1 Rap2.6L, LOC_Os02g34260 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g34270.1 ERF110, LOC_Os02g34270 Ethylene-responsive transcription factor ERF114... 0.02 OrthoFinder output from all 47 species
LOC_Os04g57340.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g11860.1 RAP2.4, LOC_Os06g11860 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os07g42510.1 RAP2.12, LOC_Os07g42510 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g10978 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Nbi_g21637 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06333 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc04g050750.2.1 Solyc04g050750 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g16502 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026573_P001 Zm00001e026573 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e040879_P001 ERF110, Zm00001e040879 Ethylene-responsive transcription factor RAP2-6... 0.02 OrthoFinder output from all 47 species
Zm00001e041533_P001 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 11 60
No external refs found!