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  5. Ppi_g15659

Ppi_g15659 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB

Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g15659

Target Alias Description ECC score Gene Family Method Actions
Aev_g03246 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.04 OrthoFinder output from all 47 species
Aob_g18325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16883.t1 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008080 NTMC2TYPE4, NTMC2T4 not classified & original description: CDS=42-1337 0.03 OrthoFinder output from all 47 species
Ceric.39G022900.1 Ceric.39G022900 not classified & original description: pacid=50582625... 0.02 OrthoFinder output from all 47 species
Dac_g08065 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04826 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Len_g00613 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00637 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Msp_g01203 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Sam_g11132 No alias membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Sam_g24830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12221 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 244
IPR000008 C2_dom 261 358
IPR000008 C2_dom 417 517
No external refs found!