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  5. Ppi_g15284

Ppi_g15284 (ATLUP2, LUP2)


Aliases : ATLUP2, LUP2

Description : squalene-hopene cyclase & original description: none


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g15284
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Aev_g20642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69508 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63185.t1 Aspi01Gene63185 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05266 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31336 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g20110.1 No alias Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.02 OrthoFinder output from all 47 species
Nbi_g30274 No alias squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004522 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2067 0.03 OrthoFinder output from all 47 species
Tin_g44706 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 81 420
IPR032697 SQ_cyclase_N 2 71
No external refs found!