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Description : EC_4.2 carbon-oxygen lyase & original description: none
Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g14736 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00173370 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| AT3G24670 | No alias | Pectin lyase-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024858 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1242 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G036500.1 | Ceric.05G036500 | EC_4.2 carbon-oxygen lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g39421 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46894 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15970 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028548001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g05272.1 | AT59, LOC_Os06g05272 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| MA_10205415g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428603g0020 | No alias | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26215 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41165 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g044750.3.1 | Solyc12g044750 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040624_P001 | Zm00001e040624 | pectate lyase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 190 | 372 |
| No external refs found! |