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Description : component *(Symplekin/Pta1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: none
Gene families : OG0002204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002204_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00088050 | ESP4,... | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G27595 | No alias | CONTAINS InterPro DOMAIN/s: Symplekin tight junction... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09476 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23718 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g63126 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g22132 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010125 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G050700.1 | Ceric.01G050700 | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G019100.1 | ESP4, Ceric.12G019100 | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g06615 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g49940.1 | LOC_Os01g49940 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g49320.1 | ESP4, LOC_Os07g49320 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06265 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Mp6g03410.1 | No alias | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27266 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08972 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Smo442688 | ESP4 | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g005330.3.1 | ESP4, Solyc09g005330 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020082_P004 | Zm00001e020082 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035946_P001 | ESP4, Zm00001e035946 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| No external refs found! |