Ppi_g13328 (EMB2219)

Aliases : EMB2219

Description : mTERF-type transcription factor & original description: none

Gene families : OG0007794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007794_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g13328

Target	Alias	Description	ECC score	Gene Family Method
Ala_g05068	EMB2219	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene68209.t1	EMB2219, Aspi01Gene68209	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g17251	EMB2219	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.10G060100.1	EMB2219, Ceric.10G060100	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000912.37	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
Dcu_g20151	EMB2219	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01031970001	EMB2219	RNA biosynthesis.organelle...	0.06	OrthoFinder output from all 47 species
LOC_Os07g04230.1	EMB2219, LOC_Os07g04230	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Ore_g29514	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g51944	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g109630.4.1	EMB2219, Solyc01g109630	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Tin_g30995	EMB2219	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e032771_P001	EMB2219, Zm00001e032771	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	356	593
IPR003690	MTERF	243	361

External Links

No external refs found!

Ppi_g13328 (EMB2219)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation