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Aliases : SE
Description : component *(SERRATE) of DCL1-HYL1 miRNA biogenesis complex & original description: none
Gene families : OG0003096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G27100 | SE | C2H2 zinc-finger protein SERRATE (SE) | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g05956 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02258 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.03G039000.1 | SE, Ceric.03G039000 | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Cre13.g575900 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14201 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08633 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027348001 | SE | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_07578 | SE | C2H2 zinc finger transcription factor. component SERRATE... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g48530.1 | SE, LOC_Os06g48530 | C2H2 zinc finger transcription factor. component SERRATE... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10038 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06846 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36418 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g54768 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e013155_P002 | SE, Zm00001e013155 | C2H2 zinc finger transcription factor. component SERRATE... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |