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  5. Ppi_g12466

Ppi_g12466 (GR-RBP4, GRP4)


Aliases : GR-RBP4, GRP4

Description : not classified & original description: none


Gene families : OG0004397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12466

Target Alias Description ECC score Gene Family Method Actions
Aev_g35604 RBP45B, ATRBP45B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02645 PAB2, PABP2, ATPAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025014 PAB1 not classified & original description: CDS=309-3914 0.03 OrthoFinder output from all 47 species
Cba_g01318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10701 ATRBP47C, RBP47C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06122 PAB6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16872 ATRBP47C', RBP47C' not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11847 PAB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11431 PAB2, PABP2, ATPAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43779 PAB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12369 ATRBP47C', RBP47C' not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30621 ATRBP47C', RBP47C' not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 511 568
IPR000504 RRM_dom 411 480
No external refs found!