Ppi_g12347


Description : not classified & original description: none


Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12347

Target Alias Description ECC score Gene Family Method Actions
Aev_g21406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13636 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28399.t1 Aspi01Gene28399 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66998.t1 Aspi01Gene66998 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011337 No alias not classified & original description: CDS=129-3209 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035990 No alias not classified & original description: CDS=440-3595 0.03 OrthoFinder output from all 47 species
Cba_g13225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24853 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.01G024800.1 Ceric.01G024800 not classified & original description: pacid=50592459... 0.03 OrthoFinder output from all 47 species
Ceric.13G047000.1 Ceric.13G047000 not classified & original description: pacid=50636886... 0.04 OrthoFinder output from all 47 species
Ceric.18G013200.1 Ceric.18G013200 not classified & original description: pacid=50621307... 0.04 OrthoFinder output from all 47 species
Ceric.23G069400.1 Ceric.23G069400 not classified & original description: pacid=50610953... 0.02 OrthoFinder output from all 47 species
Dac_g07034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g01996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05090 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10354 LNG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433891g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9297837g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g18360.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g14870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02446 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008010 No alias not classified & original description: CDS=1-366 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022429 No alias not classified & original description: CDS=62-3433 0.02 OrthoFinder output from all 47 species
Sam_g09091 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo405421 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g26803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g41427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55806 LNG1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g55838 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10611 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12819 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 870 1031
IPR032795 DUF3741-assoc 125 146
IPR022212 DUF3741 247 274
No external refs found!