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  5. Ppi_g11968

Ppi_g11968


Description : transcription factor *(REVEILLE) & original description: none


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11968

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272270 LHY1, LHY,... Multi-process regulation.circadian clock.core oscillator... 0.02 OrthoFinder output from all 47 species
AT1G01060 LHY1, LHY Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G01520 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G37260 RVE2, CIR1 Homeodomain-like superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g007041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30544 No alias transcription factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01863 No alias circadian clock factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g275350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Ehy_g02839 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025544001 No alias Multi-process regulation.circadian clock.evening element... 0.02 OrthoFinder output from all 47 species
Gb_25658 RVE1 transcription factor (MYB-related). circadian clock core... 0.02 OrthoFinder output from all 47 species
Len_g28016 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28300 EPR1, RVE7 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011198 No alias circadian clock factor *(REVEILLE) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013571 RVE1 transcription factor *(REVEILLE) & original description:... 0.02 OrthoFinder output from all 47 species
Smo166821 No alias Multi-process regulation.circadian clock.core oscillator... 0.03 OrthoFinder output from all 47 species
Solyc10g084370.3.1 Solyc10g084370 transcription factor (MYB-related). REVEILLE circadian... 0.02 OrthoFinder output from all 47 species
Zm00001e006465_P001 Zm00001e006465 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e023232_P002 Zm00001e023232 transcription factor (MYB-related). REVEILLE circadian... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 60 103
No external refs found!