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  5. Ppi_g11963

Ppi_g11963 (WIP2, NTT)


Aliases : WIP2, NTT

Description : C2H2 subclass WIP transcription factor & original description: none


Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11963

Target Alias Description ECC score Gene Family Method Actions
Aob_g01096 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g27587 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01009046001 TT1, WIP1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01033329001 WIP2, NTT RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Len_g01826 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g12905 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g55124 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e009663_P001 WIP6, DOT5,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!