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  5. Ppi_g11620

Ppi_g11620 (ROPGEF7, ATROPGEF7)


Aliases : ROPGEF7, ATROPGEF7

Description : RopGEF guanine nucleotide exchange factor *(PRONE) & original description: none


Gene families : OG0011298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11620
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Ala_g37676 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Aop_g13890 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11417.t1 ATROPGEF5,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.07 OrthoFinder output from all 47 species
Dac_g15362 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Nbi_g05769 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0174.g024523 ATROPGEF5, ROPGEF5 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Tin_g12197 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005512 PRONE_dom 94 456
No external refs found!