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  5. Ppi_g11585

Ppi_g11585 (emb2726)


Aliases : emb2726

Description : translation elongation factor *(EF-Ts) & original description: none


Gene families : OG0003250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11585
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AT4G29060 emb2726 elongation factor Ts family protein 0.03 OrthoFinder output from all 47 species
Adi_g118105 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Aev_g28882 emb2726 translation elongation factor *(EF-Ts) & original... 0.02 OrthoFinder output from all 47 species
Ala_g13148 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Aob_g08834 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Aop_g25286 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ceric.03G081000.1 emb2726, Ceric.03G081000 translation elongation factor *(EF-Ts) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.56 emb2726 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Cre12.g519180 emb2726 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dac_g05556 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Dac_g16809 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Dac_g16810 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01025 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Dde_g06930 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05564 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01015347001 emb2726 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
LOC_Os12g35630.1 emb2726, LOC_Os12g35630 EF-Ts translation elongation factor 0.04 OrthoFinder output from all 47 species
Lfl_g09522 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
MA_10436165g0010 emb2726 EF-Ts translation elongation factor 0.02 OrthoFinder output from all 47 species
Mp2g23510.1 emb2726 EF-Ts translation elongation factor 0.02 OrthoFinder output from all 47 species
Nbi_g14225 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ore_g00299 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ore_g08953 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Pir_g07418 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Pir_g59879 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g11907 emb2726 translation elongation factor *(EF-Ts) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g13399 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022632 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Spa_g11112 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Spa_g21728 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e010912_P001 emb2726, Zm00001e010912 EF-Ts translation elongation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR014039 Transl_elong_EFTs/EF1B_dimer 120 266
No external refs found!