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  5. Ppi_g10749

Ppi_g10749 (ATATH6, ATH6)


Aliases : ATATH6, ATH6

Description : subfamily ABCA transporter & original description: none


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g10749

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00139590 ATH16, ATATH16,... ABC transporter A family member 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G47740 ATATH2, ATH2, ABCA3 ABC2 homolog 2 0.02 OrthoFinder output from all 47 species
AT3G47750 ABCA4, ATATH3 ATP binding cassette subfamily A4 0.03 OrthoFinder output from all 47 species
AT3G47770 ATH5, ATATH5, ABCA6 ABC2 homolog 5 0.03 OrthoFinder output from all 47 species
AT3G47790 ATH7, ATATH7 ABC2 homolog 7 0.03 OrthoFinder output from all 47 species
AT5G61700 ATH16, ATATH16 ABC2 homolog 16 0.02 OrthoFinder output from all 47 species
Aop_g04431 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016229 ATATH6, ATH6 subfamily ABCA transporter & original description: CDS=234-3275 0.03 OrthoFinder output from all 47 species
Ceric.18G061500.1 ATATH6, ATH6,... subfamily ABCA transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g07523 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g01820.1 ATH16, ATATH16,... subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
LOC_Os08g30770.1 ATATH6, ATH6,... subfamily ABCA transporter 0.04 OrthoFinder output from all 47 species
Mp7g18420.1 ATH7, ATATH7 subfamily ABCA transporter 0.01 OrthoFinder output from all 47 species
Msp_g11278 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Smo171117 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo268954 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Tin_g31576 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014485_P003 ATH7, ATATH7,... subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 666 810
No external refs found!