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  5. Ppi_g10004

Ppi_g10004


Description : not classified & original description: none


Gene families : OG0003147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g10004
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT2G33560 BUBR1 BUB1-related (BUB1: budding uninhibited by benzymidazol 1) 0.09 OrthoFinder output from all 47 species
AT5G05510 No alias Mad3/BUB1 homology region 1 0.02 OrthoFinder output from all 47 species
Als_g05447 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.09 OrthoFinder output from all 47 species
Aop_g01182 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene63524.t1 BUBR1, Aspi01Gene63524 spindle assembly checkpoint protein *(MAD3) & original... 0.06 OrthoFinder output from all 47 species
Cre07.g351450 BUBR1 Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01013446001 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.06 OrthoFinder output from all 47 species
GSVIVT01032774001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.06 OrthoFinder output from all 47 species
Gb_15965 No alias MAD3/BUBR1 spindle assembly checkpoint protein 0.03 OrthoFinder output from all 47 species
Gb_15966 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Gb_18619 BUBR1 MAD3/BUBR1 spindle assembly checkpoint protein 0.06 OrthoFinder output from all 47 species
LOC_Os02g10020.1 BUBR1, LOC_Os02g10020 MAD3/BUBR1 spindle assembly checkpoint protein 0.06 OrthoFinder output from all 47 species
LOC_Os12g03180.1 LOC_Os12g03180 MAD3/BUBR1 spindle assembly checkpoint protein 0.03 OrthoFinder output from all 47 species
Len_g15512 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g20532 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g14545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_97040g0010 BUBR1 Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g03172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04683 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.1 OrthoFinder output from all 47 species
Sam_g03692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24970 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo404118 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.05 OrthoFinder output from all 47 species
Smo404289 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.06 OrthoFinder output from all 47 species
Solyc06g051040.4.1 Solyc06g051040 MAD3/BUBR1 spindle assembly checkpoint protein 0.02 OrthoFinder output from all 47 species
Spa_g20707 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e014092_P001 BUBR1, Zm00001e014092 MAD3/BUBR1 spindle assembly checkpoint protein 0.04 OrthoFinder output from all 47 species
Zm00001e025052_P001 BUBR1, Zm00001e025052 Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013212 Mad3/Bub1_I 6 112
No external refs found!