Zm00001d026540 (GRMZM2G086949)


Aliases : GRMZM2G086949

Description : No description available


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d026540
Cluster HCCA cluster: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT3G61830 ARF18 auxin response factor 18 0.03 Gene family
GSVIVT01021553001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
GSVIVT01023149001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os04g56850 Os04g0664400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os04g57610 Os04g0671900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os11g32110 Os11g0523800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_10431695g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
MA_122218g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_5089g0010 No alias No description available 0.04 Gene family
MA_566086g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_85955g0020 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc01g096070.3.1 Solyc01g096070.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc03g031970.3.1 Solyc03g031970.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Solyc11g069500.2.1 Solyc11g069500.2 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d017284 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d043431 GRMZM2G056120 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d043922 GRMZM2G437460 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.07 Gene family
Zm00001d051172 GRMZM2G081406 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 853 943
IPR003340 B3_DNA-bd 144 258
IPR010525 Auxin_resp 283 365
No external refs found!