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  5. Ppi_g09118

Ppi_g09118 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g09118

Target Alias Description ECC score Gene Family Method Actions
Adi_g043258 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16430 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17880 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02611 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54829.t1 PUM7, APUM7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05711 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g09040.1 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 729 762
IPR001313 Pumilio_RNA-bd_rpt 618 649
IPR001313 Pumilio_RNA-bd_rpt 694 724
IPR001313 Pumilio_RNA-bd_rpt 582 616
IPR001313 Pumilio_RNA-bd_rpt 656 686
IPR001313 Pumilio_RNA-bd_rpt 767 784
IPR001313 Pumilio_RNA-bd_rpt 801 835
IPR000571 Znf_CCCH 454 475
No external refs found!