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  5. Ppi_g08995

Ppi_g08995


Description : component *(eL15) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08995
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270230 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.04 OrthoFinder output from all 47 species
Ceric.30G015200.1 Ceric.30G015200 component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.31G036200.1 Ceric.31G036200 component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dac_g12320 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os05g19370.1 LOC_Os05g19370 component RPL15 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Ore_g41630 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g30101 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g13183 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g13184 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g24927 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc04g008460.4.1 Solyc04g008460 component RPL15 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g26061 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g55931 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e010380_P001 Zm00001e010380 component RPL15 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e032897_P001 Zm00001e032897 component RPL15 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e034995_P001 Zm00001e034995 component RPL15 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e034996_P001 Zm00001e034996 component RPL15 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 1 149
No external refs found!