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  5. Ppi_g08779

Ppi_g08779 (TRZ4)


Aliases : TRZ4

Description : EC_3.1 hydrolase acting on ester bond & original description: none


Gene families : OG0002827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08779

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00038090 TRZ4,... RNA processing.ribonuclease activities.RNase Z endoribonuclease 0.02 OrthoFinder output from all 47 species
Adi_g014251 TRZ4 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aob_g31832 TRZ4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g35504 TRZ4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06987.t1 TRZ4, Aspi01Gene06987 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z268100.1 TRZ4, Ceric.1Z268100 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G032400.1 TRZ4, Ceric.27G032400 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.31G069800.1 TRZ4, Ceric.31G069800 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021133.10 TRZ4 RNA processing.ribonuclease activities.RNase Z endoribonuclease 0.02 OrthoFinder output from all 47 species
Dde_g10517 TRZ4 EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g12800 TRZ3 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017040001 TRZ4 RNA processing.ribonuclease activities.RNase Z endoribonuclease 0.04 OrthoFinder output from all 47 species
LOC_Os01g13150.1 TRZ3, LOC_Os01g13150 endoribonuclease (RNase Z) 0.03 OrthoFinder output from all 47 species
MA_10429994g0010 TRZ4 endoribonuclease (RNase Z) 0.03 OrthoFinder output from all 47 species
Msp_g15294 TRZ3 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g11586 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g29039 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e026117_P001 TRZ4, Zm00001e026117 endoribonuclease (RNase Z) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006359 regulation of transcription by RNA polymerase III IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR027794 tRNase_Z_dom 139 190
No external refs found!