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  5. Ppi_g07596

Ppi_g07596 (RPN1A, ATRPN1A)


Aliases : RPN1A, ATRPN1A

Description : regulatory component *(RPN1) of 26S proteasome & original description: none


Gene families : OG0003700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g07596

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00242820 RPN1A, ATRPN1A,... Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Len_g01899 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp5g07110.1 RPN1A, ATRPN1A regulatory component RPN1 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Nbi_g06792 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo228162 RPN1A, ATRPN1A Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Zm00001e025223_P001 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR041433 RPN1_C 836 889
IPR040892 RPN1_N 51 354
IPR002015 Proteasome/cyclosome_rpt 486 515
No external refs found!