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  5. Ppi_g07554

Ppi_g07554


Description : not classified & original description: none


Gene families : OG0006143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g07554
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00203340 evm_27.TU.AmTr_v1... GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT5G66470 No alias RNA binding;GTP binding 0.06 OrthoFinder output from all 47 species
Adi_g012500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13805.t1 Aspi01Gene13805 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009893 No alias not classified & original description: CDS=1-903 0.05 OrthoFinder output from all 47 species
Ceric.25G026200.1 Ceric.25G026200 not classified & original description: pacid=50594372... 0.03 OrthoFinder output from all 47 species
Dac_g17788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018924001 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g49220.1 LOC_Os05g49220 GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.09 OrthoFinder output from all 47 species
Mp2g20310.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Msp_g10494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007350 No alias not classified & original description: CDS=95-1276 0.04 OrthoFinder output from all 47 species
Smo75698 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.02 OrthoFinder output from all 47 species
Spa_g10099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 366 444
IPR006073 GTP-bd 166 283
No external refs found!