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Ppi_g06949


Description : component *(GID7) of GID ubiquitination complex & original description: none


Gene families : OG0002376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06949

Target Alias Description ECC score Gene Family Method Actions
Adi_g055600 No alias component *(GID7) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
Adi_g064513 No alias component *(GID7) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
Ceric.06G051000.1 Ceric.06G051000 component *(GID7) of GID ubiquitination complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021178.1 No alias WD repeat-containing protein 26 homolog OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g03437 No alias component *(GID7) of GID ubiquitination complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 310 346
IPR001680 WD40_repeat 264 300
IPR001680 WD40_repeat 477 517
IPR001680 WD40_repeat 523 560
IPR001680 WD40_repeat 350 388
No external refs found!