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  5. Ppi_g06814

Ppi_g06814 (RGLG1)


Aliases : RGLG1

Description : E3 ubiquitin ligase *(RGLG) & original description: none


Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06814
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00070360 RGLG2,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT3G01650 RGLG1 RING domain ligase1 0.02 OrthoFinder output from all 47 species
Aev_g33551 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18014 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62084 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11094 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06099 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14222 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26782.t1 RGLG1, Aspi01Gene26782 E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26787.t1 Aspi01Gene26787 E3 ubiquitin ligase *(RGLG) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene26788.t1 Aspi01Gene26788 E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26791.t1 Aspi01Gene26791 E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47149.t1 Aspi01Gene47149 E3 ubiquitin ligase *(RGLG) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0075.g037603 No alias E3 ubiquitin ligase *(RGLG) & original description: CDS=233-1204 0.03 OrthoFinder output from all 47 species
Cba_g05132 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74655 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G023900.1 Ceric.06G023900 E3 ubiquitin ligase *(RGLG) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.06G037200.1 RGLG2, Ceric.06G037200 E3 ubiquitin ligase *(RGLG) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z003900.1 RGLG1, Ceric.1Z003900 E3 ubiquitin ligase *(RGLG) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020825.14 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g31672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35423 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12405 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g24041 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05252 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36072 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07278 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23658 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25618 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34585 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37971 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39995 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428350g0010 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Msp_g06328 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30852 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46900 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g17342 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01301 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06816 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g02034 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08521 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51392 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g52235 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53579 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55605 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14996 No alias E3 ubiquiTin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27493 RGLG1 E3 ubiquiTin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030550_P001 RGLG2, Zm00001e030550 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR010734 Copine_C 53 266
No external refs found!