Ppi_g06750 (ATCSP2, GRP2, CSDP2, CSP2)

Aliases : ATCSP2, GRP2, CSDP2, CSP2

Description : cold-responsive mRNA chaperone *(CSD) & original description: none

Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g06750
Cluster	HCCA: Cluster_278

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sacu_v1.1_s0173.g024476	ATCSP3, CSP3	cold-responsive mRNA chaperone *(CSD) & original...	0.03	OrthoFinder output from all 47 species
Solyc10g055250.1.1	ATCSP2, GRP2,...	RNA chaperone (CSP). mRNA chaperone (CSD)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	145	159
IPR001878	Znf_CCHC	183	199
IPR002059	CSP_DNA-bd	10	74

External Links

No external refs found!