Description : RNA chaperone *(RZ1) & original description: none
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g05819 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g01139 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g14283 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g21798 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G066000.1 | Ceric.09G066000 | RNA chaperone *(RZ1) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g04372 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_39691 | No alias | RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g08960.1 | LOC_Os07g08960 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g31800.1 | GR-RBP3, LOC_Os12g31800 | RNA editing factor (ORRM) | 0.01 | OrthoFinder output from all 47 species | |
Len_g30141 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g18712 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g26663 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g104840.4.1 | ATRZ-1A, Solyc01g104840 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g071560.4.1 | Solyc03g071560 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g081180.2.1 | GR-RBP3, Solyc10g081180 | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005260_P002 | Zm00001e005260 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e018330_P004 | GR-RBP3, Zm00001e018330 | RNA editing factor (ORRM) | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e033010_P001 | Zm00001e033010 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000731 | DNA synthesis involved in DNA repair | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005685 | U1 snRNP | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
BP | GO:0071897 | DNA biosynthetic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |